Developmental Biology
Chapter 1: Foundations of Developmental Biology
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What is developmental biology?
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Key questions: How do complex organisms form from a single cell?
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Overview of model organisms (e.g., Drosophila, C. elegans, zebrafish, frog, mouse)
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Historical perspective and key discoveries
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Chapter 2: Gametogenesis and Fertilization
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Spermatogenesis and oogenesis (brief, not molecular detail)
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Egg and sperm structure
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Fertilization steps: recognition, fusion, activation of development
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Species-specific barriers and block to polyspermy
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Chapter 3: Cleavage and Blastulation
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Patterns of cleavage (holoblastic, meroblastic, radial, spiral)
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Blastula structure
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Differences across animal groups
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Role of maternal determinants and cytoplasmic localization
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Chapter 4: Gastrulation and Germ Layer Formation
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Major cell movements: invagination, involution, epiboly, ingression
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Formation of ectoderm, mesoderm, and endoderm
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Concept of body axes starting to emerge
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Role of the blastopore
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Chapter 5: Axis Formation and Body Plan Specification
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Anterior-posterior, dorsal-ventral, left-right axes
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Organizer regions (e.g. Spemann-Mangold organizer)
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Role of β-catenin and Nieuwkoop center (intro level)
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Asymmetry and symmetry breaking mechanisms
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Chapter 6: Cell Fate, Determination, and Differentiation
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Concepts: potency, commitment, specification
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Autonomous vs. conditional specification
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Inductive interactions and morphogens
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Cell lineage tracing and fate maps
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Chapter 7: Pattern Formation and Morphogens
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What is a morphogen?
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French Flag Model
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Gradient-based signaling (Sonic Hedgehog, BMP, Wnt)
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Interpretation of positional information
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Segmentation and polarity (Drosophila example)
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Chapter 8: Organogenesis
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Neurulation and formation of the neural tube
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Somite segmentation
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Eye, heart, and limb development (basic overview)
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Apoptosis in shaping structures (e.g., fingers)
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Chapter 9: Stem Cells and Regeneration
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Types of stem cells: totipotent, pluripotent, multipotent
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Embryonic vs. adult stem cells
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Induced pluripotent stem cells (iPSCs)
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Examples of regeneration (planarians, amphibians, humans)
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Chapter 10: Growth Control and Timing
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Regulation of growth: size, shape, timing
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Heterochrony (change in developmental timing)
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Allometry and growth rates of organs
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Hormonal influence on development
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Chapter 11: Evolution and Development
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Deep homology and genetic toolkits
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Modularity in development
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Hox genes and evolution of body plans
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Changes in timing/placement of gene expression across species
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Chapter 12: Developmental Disorders and Teratology
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Congenital abnormalities
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Teratogens: drugs, alcohol, radiation
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Neural tube defects
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Environmental vs. genetic causes
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Chapter 13: Techniques in Developmental Biology
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Fate mapping and lineage tracing
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In situ hybridization
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Gene knockouts and transgenics (brief, focused on developmental use)
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CRISPR in embryonic systems
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Time-lapse imaging and fluorescent reporters
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